Hedgehog Signaling Pathway Database
 
desert hedgehog, Homo sapiens
Orthologs:Drosophila melanogaster, Mus musculus, Danio rerio, Gallus gallus, Rattus norvegicus, Pan troglodytes, Achaearanea tepidariorum, Ambystoma mexicanum, Amblypharyngodon hornae, Anopheles gambiae, Artemia franciscana, Astyanax fasciatus, Bos taurus, Branchiostoma belcheri, Branchiostoma floridae, Carassius auratus, Ciona intestinalis, Coturnix coturnix, Cynops pyrrhogaster, Cyprinus carpio, Danio aequipinnatus, Danio aff, Danio devario, Danio frankei, Danio kerri, Danio malabaricus, Danio pathirana, Danio pulcher, Danio cf, Drosophila hydei, Drosophilia melangaster, Drosophila pseudoobscura, Eleutherodactylus coqui, Equus caballus, Euscorpius flavicaudis, Glomeris marginata, Gryllus bimaculatus, Helobdella robusta, Hemicentrotus pulcherrimus, Hirudo medicinalis, Hydra vulgaris, Ilyanassa obsoleta, Junonia coenia, Lampetra japonica, Lytechinus variegatus, Macaca fascicularis, Meriones unguiculatus, Notophthalmus viridescens, Onchorhynchus mykiss, Oryzias latipes, Paralichthys olivaceus, Patella vulgata, Pleurodeles waltl, Pseudorasbora parva, Puntius conchonius, Puntius tetrazona, Rana catesbeiana, Rasbora elegans, Rasbora heteromorpha, Rasbora paviei, Saimiri boliviensis, Scyliorhinus canicula, Suncus murinus, Strongylocentrotus purpuratus, Takifugu rubripes, Tanichthys albonubes, Trachemys scripta, Tribolium castaneum, Trionyx sinensis, Xenopus lavis,
Related subclasses:shh, ihh
Synonyms:dhh, HHG-3, MGC35145
Evidence of Pathway Affiliation

HMM Domains

Pfam Hh-NSMART Hh-NSMART Hint-N
 2.80E-1127.40E-23
SequencesmRNA:GenBank
protein: NCBI, SwissProt
Genomic OrganizationChromosome 12: UCSC genome, NCBI

Transcript structure:

source: Ensembl
Protein Motifs Hedgehog, Hint, Endopeptidase
Size
Bubblogramlow complexity region: 2 to 20 Pfam:HH_signal: 23 to 185 Unknown region: 186 to 196 HintN: 197 to 304 HintC: 305 to 349 Unknown region: 350 to 357 low complexity region: 358 to 374 Unknown: 375 to 396

Source: SMART


BLAST
Proteome Browser: UCSC
Protein Family: pfam-Hh, Hint
Protein Sub-domains: InterPro
Phenotypes & DiseasesOMIM
ReagentsAntibody Index
Microarray DataProfile: UCSC
NCBI: GEO
mRNA ExpressionNCI: CGAP
RNAiRNAi Construct: CGAP
ReferencesPubMed
Database LinksGenome report: UCSC
Stanford SOURCE
AceView
Ensembl GeneView
     

Last updated 28-Aug-2006

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