Hedgehog Signaling Pathway Database
 
Sonic Hedgehog, Mus musculus
Orthologs:Drosophila melanogaster, Homo sapiens, Danio rerio, Gallus gallus, Rattus norvegicus, Pan troglodytes, Achaearanea tepidariorum, Ambystoma mexicanum, Amblypharyngodon hornae, Anopheles gambiae, Artemia franciscana, Astyanax fasciatus, Bos taurus, Branchiostoma belcheri, Branchiostoma floridae, Carassius auratus, Ciona intestinalis, Coturnix coturnix, Cynops pyrrhogaster, Cyprinus carpio, Danio aequipinnatus, Danio aff, Danio devario, Danio frankei, Danio kerri, Danio malabaricus, Danio pathirana, Danio pulcher, Danio cf, Drosophila hydei, Drosophilia melangaster, Drosophila pseudoobscura, Eleutherodactylus coqui, Equus caballus, Euscorpius flavicaudis, Glomeris marginata, Gryllus bimaculatus, Helobdella robusta, Hemicentrotus pulcherrimus, Hirudo medicinalis, Hydra vulgaris, Ilyanassa obsoleta, Junonia coenia, Lampetra japonica, Lytechinus variegatus, Macaca fascicularis, Meriones unguiculatus, Notophthalmus viridescens, Onchorhynchus mykiss, Oryzias latipes, Paralichthys olivaceus, Patella vulgata, Pleurodeles waltl, Pseudorasbora parva, Puntius conchonius, Puntius tetrazona, Rana catesbeiana, Rasbora elegans, Rasbora heteromorpha, Rasbora paviei, Saimiri boliviensis, Scyliorhinus canicula, Suncus murinus, Strongylocentrotus purpuratus, Takifugu rubripes, Tanichthys albonubes, Trachemys scripta, Tribolium castaneum, Trionyx sinensis, Xenopus lavis,
Related subclasses:ihh, dhh
Synonyms:shh, 9530036O11Rik
Evidence of Pathway Affiliation

HMM Domains

Pfam Hh-NSMART Hh-NSMART Hint-N
 8.90E-1213.20E-29
SequencesmRNA: GenBank
protein: NCBI, SwissProt
Genomic OrganizationChromosome 5: UCSC genome, NCBI

Transcript structure:

source: Ensembl
Protein Motifs Hedgehog, Hint, endopeptidase
Size
Bubblogramsignal peptide: 1 to 15 Unknown region: 16 to 24 Pfam:HH_signal: 25 to 185 Unknown region: 186 to 196 HintN: 197 to 305 HintC: 310 to 355 low complexity region: 359 to 379 Unknown: 380 to 437

Source: SMART


BLAST
Proteome Browser: UCSC
Protein Family: pfam-Hh, Hint
Protein Sub-domains: InterPro
Phenotypes & DiseasesOMIM, MGI
ReagentsMolecular Probes: MGI
Antibodies:MGI, Hybridoma Bank-UI
Protein: Neuromics
Antibody Index
Microarray DataProfile: UCSC
NCBI: GEO
Stanford SOURCE
mRNA ExpressionNCI: CGAP
Gene Expression: MGI
NINDS GENSAT
ReferencesPubMed
MGI
Database LinksFull Report:MGI
Genome report: UCSC
Stanford SOURCE
Ensembl GeneView
     

Last updated 28-Aug-2006

home page | about Hedgehog | gene index

© Copyright 2006